Walkthrough:
After determining with Blue how to proceed with Team Rocket, you will then begin to navigate through Silph Co. This building has eleven floors to it, and each are full of Team Rocket Grunts looking to stop you from reaching the highest level of the structure. Unfortunately, you will not be able to go from floor to floor so easily, as the entire building is one giant puzzle of Warp Tiles that lead to certain closed rooms.
Even though the main goal is to reach the eleventh floor to help the Silph Co President deal with Giovanni, the first thing you must do is reach Archer found on the fifth floor. It will take some time warping from room to room, but eventually you will find the path that leads you to Archer. After you do, you and your Rival will battle Archer in a Multi-Battle with another Team Rocket Grunt. By defeating them, the Grunt will give you the Card Key, which will open any and all doors found throughout Silph Co. With the Card Key, you will have a much easier time finding the correct path to the eleventh floor so you can end Team Rocket's takeover of the Silph Co.
Gift Pokemon
Lapras: From Businessman On Seventh Floor
Trainers
Second Floor:
Team Rocket Grunt: Level 33 Raticate
Team Rocket Grunt: Level 33 Koffing, Level 33 Koffing, Level 33 Koffing
Scientist Jerry: Level 35 Electabuzz
Scientist Conner: Level 35 Weezing
Third Floor:
Team Rocket Grunt: Level 33 Haunter
Scientist Jose: Level 35 Grimer, Level 35 Magmar
Fourth Floor:
Team Rocket Grunt: Level 33 Koffing, Level 33 Electrode
Team Rocket Grunt: Level 33 Rattata, Level 33 Grimer
Scientist Rodney: Level 35 Voltorb, Level 35 Voltorb, Level 35 Electrode
Fifth Floor:
Juggler Dalton: Level 34 Hypno, Level 34 Haunter, Level 34 Kadabra
Scientist Beau: Level 35 Muk
Team Rocket Grunt: Level 33 Ekans, Level 33 Hypno
Team Rocket Grunt: Level 33 Zubat, Level 33 Arbok
Sixth Floor:
Team Rocket Grunt: Level 33 Meowth, Level 33 Raticate
Scientist Taylor: Level 35 Magnemite, Level 35 Magnemite, Level 35 Magmar
Team Rocket Grunt: Level 33 Raticate, Level 33 Golbat
Seventh Floor:
Team Rocket Grunt: Level 33 Zubat, Level 33 Golbat
Scientist Joshua: Level 35 Koffing, Level 35 Magneton
Team Rocket Grunt: Level 33 Voltorb, Level 33 Voltorb, Level 33 Voltorb
Eighth Floor:
Team Rocket Grunt: Level 33 Grimer, Level 33 Koffing
Team Rocket Grunt: Level 33 Gastly, Level 33 Persian
Scientist Parker: Level 35 Electrode, Level 35 Porygon
Ninth Floor:
Team Rocket Grunt: Level 33 Persian
Scientist Ed: Level 35 Weezing, Level 35 Electabuzz, Level 35 Electrode
Team Rocket Grunt: Level 33 Koffing, Level 33 Haunter
Tenth Floor:
Team Rocket Grunt: Level 33 Voltorb, Level 33 Raticate
Scientist Travis: Level 35 Grimer, Level 35 Muk
Eleventh Floor:
Team Rocket Grunt: Level 33 Drowzee, Level 33 Zubat, Level 33 Golbat
Obtainable Items:
First Floor:
X Sp. Atk: Near Fountains
Second Floor:
Super Potion: Between Western Gated Areas
X Attack: Southeast Office
TM42: From Woman In Northwest Room
Third Floor:
X Sp. Def: Eastern Office
Max Lure: Near Scientist Jose
Fourth Floor:
Dire Hit: Southeast Office
Full Heal: Southwest Room (Card Key Required)
Star Piece: Southwest Room (Card Key Required)
Escape Rope: Southwest Room (Card Key Required)
Great Ball: Shelves In Southwest Room (Card Key Required)
Revive: Shelves In Southwest Room (Card Key Required)
Fifth Floor:
Poke Balls: Defeat Juggler Dalton
Card Key: Defeat Archer & Team Rocket Grunt
Max Ether: Near Scientist Beau
TM54: Southwest Room
Poke Balls: Southwest Room
Guard Spec.: Middle Server Room (Card Key Required)
Nugget: Eastern Passageway
Sixth Floor:
Max Repel: Southwest Room (Card Key Required)
Hyper Potion: Southwest Room (Card Key Required)
Super Potion: Near Scientist Taylor
X Sp. Atk: Near Employee In Main Area
PP Up: Eastern Passageway
Seventh Floor:
Rare Candy: Near Man Who Gives You Lapras (Card Key Required)
PP Up: Near Scientist Joshua
TM34: Under Desk In Eastern Room (Card Key Required)
Smart Candy: Southeast Room (Card Key Required)
Eighth Floor:
X Attack: Eastern Room
Revive: Northwest Room
Ninth Floor:
Revive: Southwest Room (Card Key Required)
Great Balls: On Shelves In Southern Room
Poke Balls: Southern Room
Ultra Balls: On Shelves Near Scientist Ed
Tenth Floor:
Full Heal: Northwest Room
Max Revive: Southwest Room
Rare Candy: Southwest Room
TM37: Southwest Room
Eleventh Floor:
Max Elixir: Eastern Section
Master Ball: From President After Defeating Team Rocket
Post Game
Walkthrough
After defeating the Elite Four and starting the Master Trainers Challenge, you will find a number of Master Trainers in Silph Co. In total, there will be three Master Trainers to defeat.
Trainers
First Floor:
Ace Trainer Leopold (Master Trainer): Level 75 Kingler
Fourth Floor:
Black Belt Masahiro (Master Trainer): Level 65 Machop
Eleventh Floor:
Lass Yumi (Master Trainer): Level 75 Wigglytuff