For this game, there are two tracks that are available to the player: the Superstar Saga and the Minion quest.
In the Superstar Saga, this is the default mission that the Super Bros. will undertake. It is in this track the story mission of recovering Princess Peach's voice becomes the main priority and objective. Thebrothers begin the mission by, unexpectedly, teaming up with one of their meanest and baddest foes ever: Bowser!
With that, Bowser allows Mario and Luigi aboard his ship to head to Beanbean Kingdom and complete the mission of recovering Princess Peach's lost voice.
For the Minion quest, another mission is underway as, this time, Bowser is the one who needs saving. In the middle of everything, Bowser suddenly starts missing. And with no leader to follow, Bowser's demotivated army is brainwashed.
In this mode, players will get the chance to play as one of Bowser's trusted captains in order to find Bowser.