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Weapons with the same name can't be swapped between models. For example, a minigun installed on a Protectron arm cannot be installed on a Sentry arm and vice versa.
Weapons are dependent on the arm they're installed on and you can install a weapon designed for a different robot type as long as you install the corresponding arm model of the weapon. So let's say you have a sentry rocket launcher in stock that you want to install on a Robobrain Torso, you can do that as long as you install a sentry arm first.
Some weapons will be aesthetically changed from different automatron models to fit their model types. There are no changes in the materials needed, stats, etc.